pal.supgma

package pal.supgma

Class

Description

RateHandler

RateHandler.Utils

SUPGMABase

SUPGMABase.CISummary

SUPGMABase.PopulationParameters

SUPGMADistanceMatrix

Corrects distances in a distance matrix such that all tips appear contemporaneous, given a time/date and rate information for the taxa.

SUPGMATree

constructs an SUPGMA tree from pairwise distances.

ThetaHandler

ThetaHandler.Utils