Uses of Interface
pal.substmodel.SingleSplitDistribution
Packages that use SingleSplitDistribution
Package
Description
Classes for evaluating evolutionary hypothesis (chi-square and likelihood
criteria) and estimating model parameters.
Classes describing substitution models, i.e.
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Uses of SingleSplitDistribution in pal.eval
Methods in pal.eval with parameters of type SingleSplitDistributionModifier and TypeMethodDescriptionstatic final MolecularClockLikelihoodModel.InstanceSingleSplitMolecularClockLikelihoodModel.createInstance(RateMatrixGroup beforeSplitMatrices, RateMatrixGroup afterSplitMatrics, NeoParameterized acrossSplitParameters, SingleSplitDistribution probabilityModel, double splitTime) static final MolecularClockLikelihoodModel.InstanceSingleSplitMolecularClockLikelihoodModel.createInstance(RateMatrixGroup beforeSplitMatrices, RateMatrixGroup afterSplitMatrics, NeoParameterized acrossSplitParameters, SingleSplitDistribution probabilityModel, LHCalculator.Factory baseFactory, double splitTime) -
Uses of SingleSplitDistribution in pal.substmodel
Classes in pal.substmodel that implement SingleSplitDistributionModifier and TypeClassDescriptionclassTitle: ConstantIndependentSingleSplitDistributionclassTitle: SaturatedSingleSplitDistributionclassTitle: VariableIndependentSingleSplitDistribution