Uses of Class
pal.misc.PalObjectEvent
Packages that use PalObjectEvent
Package
Description
Classes for evaluating evolutionary hypothesis (chi-square and likelihood
criteria) and estimating model parameters.
Classes that don't fit elsewhere ;^)
Classes describing substitution models, i.e.
-
Uses of PalObjectEvent in pal.eval
Methods in pal.eval with parameters of type PalObjectEventModifier and TypeMethodDescriptionvoidFastLikelihoodCalculator.parametersChanged(PalObjectEvent pe) voidGeneralLikelihoodCalculator.parametersChanged(PalObjectEvent pe) voidFastLikelihoodCalculator.structureChanged(PalObjectEvent pe) voidGeneralLikelihoodCalculator.structureChanged(PalObjectEvent pe) -
Uses of PalObjectEvent in pal.misc
Methods in pal.misc with parameters of type PalObjectEventModifier and TypeMethodDescriptionprotected voidPalObjectListener.EventGenerator.fireParametersChangedEvent(PalObjectEvent pe) Called by subclasses to fire a specific PalObjectEvent on all listenersprotected voidPalObjectListener.EventGenerator.fireStructureChangedEvent(PalObjectEvent pe) Called by subclasses to fire a specific PalObjectEvent on all listenersvoidPalObjectListener.parametersChanged(PalObjectEvent pe) Signifies that parametric valued governing the state of this Object have changed.voidPalObjectListener.structureChanged(PalObjectEvent pe) Signifies that the structure of the object has changed (for example in trees to topology has changed) -
Uses of PalObjectEvent in pal.substmodel
Methods in pal.substmodel with parameters of type PalObjectEventModifier and TypeMethodDescriptionprotected voidAbstractRateMatrix.fireParametersChangedEvent(PalObjectEvent pe) voidCachedRateMatrix.parametersChanged(PalObjectEvent pe) voidCachedRateMatrix.structureChanged(PalObjectEvent pe)