Uses of Class
pal.misc.MutableDouble
Packages that use MutableDouble
Package
Description
Classes that don't fit elsewhere ;^)
Classes describing substitution models, i.e.
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Uses of MutableDouble in pal.misc
Constructors in pal.misc with parameters of type MutableDouble -
Uses of MutableDouble in pal.substmodel
Methods in pal.substmodel that return MutableDoubleModifier and TypeMethodDescriptionstatic final MutableDoubleYangCodonModel.createKappaStore(double initialValue) static final MutableDoubleYangCodonModel.createKappaStore(double initialValue, String name) static final MutableDoubleYangCodonModel.createOmegaStore(double initialValue) static final MutableDoubleYangCodonModel.createOmegaStore(double initialValue, String name) Constructors in pal.substmodel with parameters of type MutableDoubleModifierConstructorDescriptionNeutralSelectionRateMatrixGroup(MutableDouble kappaStore, double[] freqs, CodonTable table) PositiveSelectionRateMatrixGroup(MutableDouble kappaStore, MutableDouble omegaStore, double[] freqs, CodonTable table)