Package pal.misc

Interface Report

All Known Subinterfaces:
AnnotationAlignment, CharacterAlignment, RateMatrix, SubstitutionModel
All Known Implementing Classes:
AbstractAlignment, AbstractRateMatrix, AminoAcidModel, BLOSUM62, BootstrappedAlignment, CachedRateMatrix, ClusterTree, CoalescentIntervals, CodonModel, ConcatenatedAlignment, ConcatenatedAnnotatedAlignment, ConstantMutationRate, ConstantPopulation, ConstExpConst, ConstExpGrowth, CPREV, Dayhoff, DemographicModel, ExpandingPopulation, ExponentialGrowth, F81, F84, GammaRates, GapBalancedAlignment, GeneralRateDistributionSubstitutionModel, GTR, HKY, IndelAlignment, IndelAnnotatedAlignment, InvariableSites, JTT, JumbledAlignment, KishinoHasegawaTest, ModelSupport, MTREV24, MultiLocusAnnotatedAlignment, MutationRateModel, NeighborJoiningTree, NucleotideModel, RateDistribution, ReadAlignment, ReadAlignmentOld, ReadTree, ShimodairaHasegawaTest, SimpleAlignment, SimpleAnnotatedAlignment, SimpleCharacterAlignment, SimpleTree, SimulatedAlignment, SingleClassSubstitutionModel, SitePattern, SkylinePlot, SteppedMutationRate, StrippedAlignment, StrippedAnnotatedAlignment, SUPGMATree, TN, Tree.TreeBase, TwoStateModel, UniformRate, UPGMATree, VT, WAG, WindowedMutationRate, YangCodonModel, YangCodonModel.SimpleNeutralSelection, YangCodonModel.SimplePositiveSelection
public interface Report
interface for classes that can print out a human readable report of itself
Version:
$Id: Report.java,v 1.4 2002/12/05 04:27:28 matt Exp $
Author:
Korbinian Strimmer

  • Method Summary

    Modifier and Type
    Method
    Description
    void
    report(PrintWriter out)
    print human readable report (e.g., on parameters and associated model)

  • Method Details

    • report

      void report(PrintWriter out)
      print human readable report (e.g., on parameters and associated model)
      Parameters:
      out - output stream