Uses of Class
pal.datatype.SimpleDataType

Packages that use SimpleDataType
Package
Description
pal.datatype
Classes describing data types (nucleotides, amino acids, codons, codon tables etc.)

  • Uses of SimpleDataType in pal.datatype

    Subclasses of SimpleDataType in pal.datatype
    Modifier and Type
    Class
    Description
    class 
    AminoAcids
    implements DataType for amino acids
    class 
    Codons
    implements DataType for all Codons (including terminators).
    class 
    GapBalanced
    implements a ResidueDataType for GapBalanced notation.
    class 
    IUPACNucleotides
    implements DataType for nucleotides with ambiguous characters
    class 
    Nucleotides
    implements DataType for nucleotides
    class 
    NumericDataType
    This datatype stores numeric values.
    class 
    SpecificAminoAcids
    implements a MolecularDataType for amino acids, where we specifiy the Codon Table basis of amino acid by supplying the CodonTable which is/was used for converting Nucleotide sequences to Amino Acids.
    class 
    StateRemover
    A standard data type, but with characters removed
    class 
    TwoStates
    implements DataType for two-state data