![]() |
RDKit
Open-source cheminformatics and machine learning.
|
#include <DistViolationContrib.h>
Public Member Functions | |
| DistViolationContrib () | |
| DistViolationContrib (ForceFields::ForceField *owner, unsigned int idx1, unsigned int idx2, double ub, double lb, double weight=1.0) | |
| Constructor. More... | |
| double | getEnergy (double *pos) const override |
| returns our contribution to the energy of a position More... | |
| void | getGrad (double *pos, double *grad) const override |
| calculates our contribution to the gradients of a position More... | |
| DistViolationContrib * | copy () const override |
| return a copy More... | |
Public Member Functions inherited from ForceFields::ForceFieldContrib | |
| ForceFieldContrib () | |
| ForceFieldContrib (ForceFields::ForceField *owner) | |
| virtual | ~ForceFieldContrib () |
| virtual double | getEnergy (double *pos) const =0 |
| returns our contribution to the energy of a position More... | |
| virtual void | getGrad (double *pos, double *grad) const =0 |
| calculates our contribution to the gradients of a position More... | |
| virtual ForceFieldContrib * | copy () const =0 |
| return a copy More... | |
Additional Inherited Members | |
Protected Attributes inherited from ForceFields::ForceFieldContrib | |
| ForceField * | dp_forceField {nullptr} |
| our owning ForceField More... | |
A term to capture the violation of the upper and lower bounds by distance between two points
Definition at line 19 of file DistViolationContrib.h.
|
inline |
Definition at line 22 of file DistViolationContrib.h.
| DistGeom::DistViolationContrib::DistViolationContrib | ( | ForceFields::ForceField * | owner, |
| unsigned int | idx1, | ||
| unsigned int | idx2, | ||
| double | ub, | ||
| double | lb, | ||
| double | weight = 1.0 |
||
| ) |
Constructor.
| owner | pointer to the owning ForceField |
| idx1 | index of end1 in the ForceField's positions |
| idx2 | index of end2 in the ForceField's positions |
| ub | Upper bound on the distance |
| lb | Lower bound on the distance |
| weight | optional weight for this contribution |
|
inlineoverridevirtual |
return a copy
Implements ForceFields::ForceFieldContrib.
Definition at line 40 of file DistViolationContrib.h.
|
overridevirtual |
returns our contribution to the energy of a position
Implements ForceFields::ForceFieldContrib.
|
overridevirtual |
calculates our contribution to the gradients of a position
Implements ForceFields::ForceFieldContrib.