Uses of Class
com.actelion.research.util.datamodel.IntVec

Packages that use IntVec

Package	Description
com.actelion.research.calc
com.actelion.research.chem.mcs
com.actelion.research.chem.properties.complexity
com.actelion.research.util.datamodel

Uses of IntVec in com.actelion.research.calc

Methods in com.actelion.research.calc that return IntVec

Modifier and Type	Method	Description
static IntVec	MatrixFunctions.getNonZeroCols(Matrix X)

Uses of IntVec in com.actelion.research.chem.mcs

Methods in com.actelion.research.chem.mcs with parameters of type IntVec

Modifier and Type	Method	Description
void	SubStructSearchBondIndex.setBondIndex(IntVec ivBondIndex)

Uses of IntVec in com.actelion.research.chem.properties.complexity

Methods in com.actelion.research.chem.properties.complexity that return IntVec

Modifier and Type	Method	Description
IntVec	MultipleNonOverlapSolution.getCheckerArray()

Uses of IntVec in com.actelion.research.util.datamodel

Methods in com.actelion.research.util.datamodel that return IntVec

Modifier and Type	Method	Description
IntVec	IntVec.add(IntVec dvVec)
static IntVec	IntVec.AND(IntVec iv1, IntVec iv2)	Makes an logical AND and calculates the hash code.
static IntVec	IntVec.devide(IntVec iv1, IntVec iv2)
static IntVec	IntVec.maskByteWise(IntVec mask, IntVec query)
static IntVec	IntVec.minus(IntVec dVec1, IntVec dVec2)
IntVec	IntVec.mult(double factor)
static IntVec	IntVec.multEl(IntVec iv1, IntVec iv2)	Elementwise multiplication
static IntVec	IntVec.OR(IntVec iv1, IntVec iv2)	Makes an logical OR and calculates the hash code.
static IntVec	IntVec.OR(java.util.List<IntVec> li)	Makes an logical OR and calculates the hash code.
static IntVec	IntVec.plus(IntVec dVec1, IntVec dVec2)
static IntVec[]	IntVec.read(java.io.File file)
static IntVec	IntVec.read(java.io.InputStream s)
static IntVec	IntVec.readBitStringDense(java.lang.String s)
IntVec	IntVec.sub(IntVec dvSub)	Substraction
static IntVec	IntVec.subtractByteWise(IntVec iv1, IntVec iv2)

Methods in com.actelion.research.util.datamodel that return types with arguments of type IntVec

Modifier and Type	Method	Description
static java.util.List<IntVec>	IntVec.readBitStringDense(java.io.File fi)

Methods in com.actelion.research.util.datamodel with parameters of type IntVec

Modifier and Type	Method	Description
IntVec	IntVec.add(IntVec dvVec)
static IntVec	IntVec.AND(IntVec iv1, IntVec iv2)	Makes an logical AND and calculates the hash code.
static int	IntVec.calculateHashCode(IntVec iv)
int	IntVec.compareTo(IntVec iv)
void	IntVec.copy(IntVec ivOrigin)
static double	IntVec.cubicDistance(IntVec dVec1, IntVec dVec2)
static IntVec	IntVec.devide(IntVec iv1, IntVec iv2)
boolean	IntVec.equal(IntVec iv)
static int[]	IntVec.extractForGivenResolution(IntVec iv, int nValues, int bitsResolution)	Converts the IntVec into an array.
static double	IntVec.getCosine(IntVec iv1, IntVec iv2)
static double	IntVec.getEuclidDist(IntVec iv1, IntVec iv2)	Euclidean distance
static double	IntVec.getEuclidDistBitWise(IntVec iv1, IntVec iv2)
static double	IntVec.getEuclidDistFast(IntVec dVec1, IntVec dVec2)	Euclidean distance without sqrt
static int	IntVec.getOverlap(IntVec iv1, IntVec iv2)
static double	IntVec.getScoreFracBitsCommonQuery(IntVec query, IntVec base)	(sum bits set common) / (sum bits set in query)
static double	IntVec.getScoreFracBitsInCommonBitWise(IntVec v1, IntVec v2)	(sum bits set common) / (sum bits set in both)
static double	IntVec.getScoreQueryInBase(IntVec query, IntVec base)
static double	IntVec.getScoreQueryInBaseBitWise(IntVec query, IntVec base)
static double	IntVec.getScoreQueryInBaseByteWise(IntVec query, IntVec base)
static double	IntVec.getTanimotoDist(IntVec iv1, IntVec iv2)	Calculates the Inverse Tanimoto coefficient
static double	IntVec.getTanimotoDistBitWise(IntVec iv1, IntVec iv2)	Calculates the Tanimoto coefficient
static double	IntVec.getTanimotoDistInv(IntVec iv1, IntVec iv2)
static double	IntVec.getTanimotoDistInvBitWise(IntVec iv1, IntVec iv2)	Calculates the Inverse Tanimoto coefficient
static double	IntVec.getTanimotoDistInvByteWise(IntVec iv1, IntVec iv2)
ModelXYIndex	ModelXYIndex.getVariableSelectionOnX(IntVec iv)
static double	IntVec.manhattanBlockDistance(IntVec iv1, IntVec iv2)
static IntVec	IntVec.maskByteWise(IntVec mask, IntVec query)
static IntVec	IntVec.minus(IntVec dVec1, IntVec dVec2)
static double	IntVec.mult(IntVec iv1, IntVec iv2)
static double	IntVec.multByteWise(IntVec iv1, IntVec iv2)
static IntVec	IntVec.multEl(IntVec iv1, IntVec iv2)	Elementwise multiplication
static IntVec	IntVec.OR(IntVec iv1, IntVec iv2)	Makes an logical OR and calculates the hash code.
static IntVec	IntVec.plus(IntVec dVec1, IntVec dVec2)
void	IntVec.set(IntVec v)	Don't forget to set the hash code!
IntVec	IntVec.sub(IntVec dvSub)	Substraction
static IntVec	IntVec.subtractByteWise(IntVec iv1, IntVec iv2)

Method parameters in com.actelion.research.util.datamodel with type arguments of type IntVec

Modifier and Type	Method	Description
static IntVec	IntVec.OR(java.util.List<IntVec> li)	Makes an logical OR and calculates the hash code.
static void	IntVec.writeBitStringDense(java.io.File fi, java.util.List<IntVec> li)

Constructors in com.actelion.research.util.datamodel with parameters of type IntVec

Constructor	Description
IntVec(IntVec iv)	Deep copy, hash code is calculated.