Package com.actelion.research.io

Class StringReadChannel

java.lang.Object

com.actelion.research.io.StringReadChannel

public class StringReadChannel
extends java.lang.Object

StringReadChannel 2007 MvK: Start implementation 25.06.2009 MvK: implementation changed 12.02.2014 MvK: added charset encoding to handle Umlaute. 24.04.2014 MvK: Pipeline replaced simple LinkedList because of needed concurrent access. 29.01.2015 MvK: Increased capacity CAPACITY_LINE_BUFFER to 10,000,000 because of overflow when reading PubMed records. 03.06.2015 MvK: Increased capacity CAPACITY_LINE_BUFFER to 50,000,000 because of overflow when reading g2dDiseasePublicationSlope.dwar

Constructor Summary

Constructors

Constructor	Description
StringReadChannel(java.nio.channels.ReadableByteChannel ch)

Method Summary

Modifier and Type	Method	Description
void	close()
void	finalize()
boolean	hasMoreLines()
java.lang.String	readLine()
static void	skipUntilLineMatchesRegEx(StringReadChannel src, java.lang.String regex)
static java.lang.String	skipUntilLineMatchesRegEx(StringReadChannel src, java.lang.String regex, int limit)

Methods inherited from class java.lang.Object

clone, equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

StringReadChannel

public StringReadChannel(java.nio.channels.ReadableByteChannel ch)
                  throws java.io.IOException

Throws:

java.io.IOException

Method Detail

hasMoreLines

public boolean hasMoreLines()
                     throws java.io.IOException

Throws:

java.io.IOException

readLine

public java.lang.String readLine()
                          throws java.io.IOException

Returns:

null if EOF reached.

Throws:

java.io.IOException

finalize

public void finalize()
              throws java.io.IOException

Overrides:

finalize in class java.lang.Object

Throws:

java.io.IOException

skipUntilLineMatchesRegEx

public static void skipUntilLineMatchesRegEx(StringReadChannel src,
                                             java.lang.String regex)
                                      throws java.lang.NoSuchFieldException,
                                             java.io.IOException

Throws:

java.lang.NoSuchFieldException

java.io.IOException

skipUntilLineMatchesRegEx

public static java.lang.String skipUntilLineMatchesRegEx(StringReadChannel src,
                                                         java.lang.String regex,
                                                         int limit)
                                                  throws java.lang.NoSuchFieldException,
                                                         java.io.IOException

Throws:

java.lang.NoSuchFieldException

java.io.IOException

close

public void close()
           throws java.io.IOException

Throws:

java.io.IOException