Package com.actelion.research.chem.io

Class RXNFileParser

  • public class RXNFileParser
extends java.lang.Object

    • Constructor Summary

      Constructors 
      Constructor Description
      RXNFileParser()  

    • Method Summary

      All Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      Reaction getReaction​(java.io.File file)  
      Reaction getReaction​(java.io.File file, boolean ignoreIdCode)  
      Reaction getReaction​(java.lang.String buffer)  
      Reaction getReaction​(java.lang.String buffer, boolean ignoreIdCode)  
      boolean parse​(Reaction theReaction, java.io.BufferedReader theReader)  
      boolean parse​(Reaction theReaction, java.io.BufferedReader theReader, boolean ignoreIdCode)  
      boolean parse​(Reaction theReaction, java.io.File file)  
      boolean parse​(Reaction theReaction, java.io.File file, boolean ignoreIdCode)  
      boolean parse​(Reaction theReaction, java.lang.String buffer)  
      boolean parse​(Reaction theReaction, java.lang.String buffer, boolean ignoreIdCode)  

      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

    • Constructor Detail

      • RXNFileParser

        public RXNFileParser()

    • Method Detail

      • getReaction

        public Reaction getReaction​(java.lang.String buffer)
                     throws java.lang.Exception
        Throws:
        java.lang.Exception

      • getReaction

        public Reaction getReaction​(java.lang.String buffer,
                            boolean ignoreIdCode)
                     throws java.lang.Exception
        Throws:
        java.lang.Exception

      • getReaction

        public Reaction getReaction​(java.io.File file)
                     throws java.lang.Exception
        Throws:
        java.lang.Exception

      • getReaction

        public Reaction getReaction​(java.io.File file,
                            boolean ignoreIdCode)
                     throws java.lang.Exception
        Throws:
        java.lang.Exception

      • parse

        public boolean parse​(Reaction theReaction,
                     java.lang.String buffer)
              throws java.lang.Exception
        Throws:
        java.lang.Exception

      • parse

        public boolean parse​(Reaction theReaction,
                     java.lang.String buffer,
                     boolean ignoreIdCode)
              throws java.lang.Exception
        Throws:
        java.lang.Exception

      • parse

        public boolean parse​(Reaction theReaction,
                     java.io.File file)
              throws java.lang.Exception
        Throws:
        java.lang.Exception

      • parse

        public boolean parse​(Reaction theReaction,
                     java.io.File file,
                     boolean ignoreIdCode)
              throws java.lang.Exception
        Throws:
        java.lang.Exception

      • parse

        public boolean parse​(Reaction theReaction,
                     java.io.BufferedReader theReader)
              throws java.lang.Exception
        Throws:
        java.lang.Exception

      • parse

        public boolean parse​(Reaction theReaction,
                     java.io.BufferedReader theReader,
                     boolean ignoreIdCode)
              throws java.lang.Exception
        Throws:
        java.lang.Exception