org.openscience.jmol.app.janocchio.LoadMeasureThreadJSON

All Implemented Interfaces:: Runnable

public class LoadMeasureThreadJSON extends LoadMeasureThread

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Thread
Thread.State, Thread.UncaughtExceptionHandler
Field Summary

Fields

Modifier and Type

Field

Description

(package private) Map<String,Object>

data

Fields inherited from class org.openscience.jmol.app.janocchio.LoadMeasureThread
command, inp, nmrPanel

Fields inherited from class java.lang.Thread
MAX_PRIORITY, MIN_PRIORITY, NORM_PRIORITY
Constructor Summary

Constructors

Constructor

Description

LoadMeasureThreadJSON(NMR_JmolPanel nmrPanel, Map<String,Object> jsonData)
Method Summary

Modifier and Type

Method

Description

private double

getDouble(Map<String,Object> p, String key)

private static int

getInt(Map<String,Object> noe, String key)

Map<String,Object>

getNmrDataJSON()

int

jumpBestFrame()

protected void

setCouples()

protected boolean

setLabels()

protected void

setMore()

protected void

setNOEs()

void

writeNamfisFiles(String name)

void

writeNmrDataJSON(File file)

private void

writeVector(Vector<?> vector, PrintWriter out)

private void

writeZip(Vector<String> v, String outFilename)

Methods inherited from class org.openscience.jmol.app.janocchio.LoadMeasureThread
addCommand, addCouple, addNOE, loadAndRun, run

Methods inherited from class java.lang.Thread
activeCount, checkAccess, clone, countStackFrames, currentThread, dumpStack, enumerate, getAllStackTraces, getContextClassLoader, getDefaultUncaughtExceptionHandler, getId, getName, getPriority, getStackTrace, getState, getThreadGroup, getUncaughtExceptionHandler, holdsLock, interrupt, interrupted, isAlive, isDaemon, isInterrupted, join, join, join, onSpinWait, resume, setContextClassLoader, setDaemon, setDefaultUncaughtExceptionHandler, setName, setPriority, setUncaughtExceptionHandler, sleep, sleep, start, stop, suspend, toString, yield

Methods inherited from class java.lang.Object
equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Details
- data
  
  Map<String,Object> data
Constructor Details
- LoadMeasureThreadJSON
  
  public LoadMeasureThreadJSON(NMR_JmolPanel nmrPanel, Map<String,Object> jsonData)
Method Details
- setMore
  
  protected void setMore()
  
  Overrides:
  
  setMore in class LoadMeasureThread
- setNOEs
  
  protected void setNOEs()
  
  Overrides:
  
  setNOEs in class LoadMeasureThread
- setCouples
  
  protected void setCouples()
  
  Overrides:
  
  setCouples in class LoadMeasureThread
- setLabels
  
  protected boolean setLabels()
  
  Overrides:
  
  setLabels in class LoadMeasureThread
- getDouble
  
  private double getDouble(Map<String,Object> p, String key)
- getInt
  
  private static int getInt(Map<String,Object> noe, String key)
- writeNamfisFiles
  
  public void writeNamfisFiles(String name)
- writeVector
  
  private void writeVector(Vector<?> vector, PrintWriter out)
- writeZip
  
  private void writeZip(Vector<String> v, String outFilename)
- writeNmrDataJSON
  
  public void writeNmrDataJSON(File file) throws Exception
  
  Throws:
  
  Exception
- getNmrDataJSON
  
  public Map<String,Object> getNmrDataJSON()
- jumpBestFrame
  
  public int jumpBestFrame()

Class LoadMeasureThreadJSON

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Thread

Field Summary

Fields inherited from class org.openscience.jmol.app.janocchio.LoadMeasureThread

Fields inherited from class java.lang.Thread

Constructor Summary

Method Summary

Methods inherited from class org.openscience.jmol.app.janocchio.LoadMeasureThread

Methods inherited from class java.lang.Thread

Methods inherited from class java.lang.Object

Field Details

data

Constructor Details

LoadMeasureThreadJSON

Method Details

setMore

setNOEs

setCouples

setLabels

getDouble

getInt

writeNamfisFiles

writeVector

writeZip

writeNmrDataJSON

getNmrDataJSON

jumpBestFrame