Package org.jmol.shape

Class MeshCollection

java.lang.Object
org.jmol.shape.Shape
org.jmol.shape.MeshCollection
Direct Known Subclasses:
CGO, Draw, Isosurface
public abstract class MeshCollection extends Shape

  • Field Details

    • jvxlData

      protected JvxlData jvxlData

    • meshCount

      public int meshCount

    • meshes

      public Mesh[] meshes

    • currentMesh

      public Mesh currentMesh

    • isFixed

      public boolean isFixed

    • nUnnamed

      public int nUnnamed

    • colix

      public short colix

    • explicitID

      public boolean explicitID

    • previousMeshID

      protected String previousMeshID

    • linkedMesh

      protected Mesh linkedMesh

    • modelIndex

      protected int modelIndex

    • displayWithinDistance2

      protected float displayWithinDistance2

    • isDisplayWithinNot

      protected boolean isDisplayWithinNot

    • displayWithinPoints

      protected javajs.util.Lst<javajs.util.P3> displayWithinPoints

    • bsDisplay

      protected javajs.util.BS bsDisplay

    • title

      public String[] title

    • pickedMesh

      protected Mesh pickedMesh

    • pickedModel

      protected int pickedModel

    • pickedVertex

      protected int pickedVertex

    • pickedPt

      protected javajs.util.T3 pickedPt

    • connections

      protected int[] connections

    • htObjects

      protected Map<String,Mesh> htObjects

    • color

      protected int color

    • PREVIOUS_MESH_ID

      public static final String PREVIOUS_MESH_ID
      See Also:

  • Constructor Details

    • MeshCollection

      public MeshCollection()

  • Method Details

    • setMesh

      private Mesh setMesh(String thisID)

    • allocMesh

      public void allocMesh(String thisID, Mesh m)

    • merge

      public void merge(MeshCollection mc)
      called by ParallelProcessor at completion
      Parameters:
      mc -

    • initShape

      public void initShape()
      Specified by:
      initShape in class Shape

    • setPropMC

      protected void setPropMC(String propertyName, Object value, javajs.util.BS bs)

    • setTitle

      protected String[] setTitle(Object value)

    • checkExplicit

      protected void checkExplicit(String id)

    • setTokenProperty

      protected void setTokenProperty(int tokProp, boolean bProp, boolean testD)

    • setMeshTokenProperty

      private void setMeshTokenProperty(Mesh m, int tokProp, boolean bProp, boolean testD)

    • getPropDataMC

      protected boolean getPropDataMC(String property, Object[] data)

    • getMeshList

      protected javajs.util.Lst<Mesh> getMeshList(String key, boolean justOne)
      Get matching list of meshes, order reversed
      Parameters:
      key -
      justOne -
      Returns:
      list in reverse order, highest index first

    • getPropMC

      protected Object getPropMC(String property, int index)

    • getValues

      protected Object getValues(Mesh mesh)

    • getVertices

      protected Object getVertices(Mesh mesh)

    • clean

      protected void clean()

    • deleteMesh

      private void deleteMesh()

    • deleteMeshKey

      protected void deleteMeshKey(String key)

    • deleteMeshI

      public void deleteMeshI(int i)

    • resetObjects

      protected void resetObjects()

    • getMesh

      public Mesh getMesh(String thisID)

    • getIndexFromName

      public int getIndexFromName(String id)
      Overrides:
      getIndexFromName in class Shape
      Returns:
      index

    • setModelVisibilityFlags

      public void setModelVisibilityFlags(javajs.util.BS bsModels)
      Overrides:
      setModelVisibilityFlags in class Shape

    • setStatusPicked

      protected void setStatusPicked(int flag, javajs.util.T3 v, Map<String,Object> map)

    • getPickedPoint

      protected Map<String,Object> getPickedPoint(javajs.util.T3 v, int modelIndex)