Package org.jmol.shape

Class Measures

java.lang.Object
org.jmol.shape.Shape
org.jmol.shape.AtomShape
org.jmol.shape.Measures
All Implemented Interfaces:
JmolMeasurementClient
public class Measures extends AtomShape implements JmolMeasurementClient

  • Field Details

    • bsSelected

      private javajs.util.BS bsSelected

    • strFormat

      private String strFormat

    • mustBeConnected

      private boolean mustBeConnected

    • mustNotBeConnected

      private boolean mustNotBeConnected

    • radiusData

      private RadiusData radiusData

    • intramolecular

      private Boolean intramolecular

    • measureAllModels

      private boolean measureAllModels

    • measurementCount

      public int measurementCount

    • measurements

      public final javajs.util.Lst<Measurement> measurements

    • mPending

      public MeasurementPending mPending

    • colix

      public short colix

    • tickInfo

      TickInfo tickInfo

    • defaultTickInfo

      public TickInfo defaultTickInfo

    • font3d

      public Font font3d

    • htMin

      private Map<String,Integer> htMin

    • tokAction

      private int tokAction

  • Constructor Details

    • Measures

      public Measures()

  • Method Details

    • initModelSet

      protected void initModelSet()
      Overrides:
      initModelSet in class AtomShape

    • initShape

      public void initShape()
      Overrides:
      initShape in class AtomShape

    • setSize

      protected void setSize(int size, javajs.util.BS bsSelected)
      Overrides:
      setSize in class AtomShape

    • setProperty

      public void setProperty(String propertyName, Object value, javajs.util.BS bsAtoms)
      Specified by:
      setProperty in class Shape

    • setSingleItem

      private Measurement setSingleItem(javajs.util.Lst<Object> vector)

    • getProperty

      public Object getProperty(String property, int index)
      Overrides:
      getProperty in class Shape
      Returns:
      true if serviced

    • clear

      public void clear()

    • setColor

      private void setColor(short colix)

    • setFormats

      private void setFormats(String format)

    • showHide

      private void showHide(boolean isHide)

    • showHideM

      private void showHideM(Measurement m, boolean isHide)

    • toggle

      private void toggle(Measurement m)

    • toggleOn

      private void toggleOn(int[] indices)

    • deleteM

      private void deleteM(Measurement m)

    • deleteO

      private void deleteO(Object value)

    • defineAll

      private void defineAll(int iPt, Measurement m, boolean isDelete, boolean isShow, boolean doSelect)

    • find

      private int find(Measurement m)

    • setIndices

      private void setIndices()

    • define

      private void define(MeasurementData md, int tokAction)

    • processNextMeasure

      public void processNextMeasure(Measurement m)
      Specified by:
      processNextMeasure in interface JmolMeasurementClient

    • defineMeasurement

      private void defineMeasurement(int i, Measurement m, boolean doSelect)

    • getMessage

      private static String getMessage(Measurement m, boolean asBitSet)

    • deleteI

      private void deleteI(int i)

    • doAction

      private void doAction(MeasurementData md, String id, int tok)

    • reformatDistances

      private void reformatDistances()

    • getAllInfo

      private javajs.util.Lst<Map<String,Object>> getAllInfo()

    • getAllInfoAsString

      private String getAllInfoAsString()

    • getInfo

      private Map<String,Object> getInfo(int index)

    • getInfoAsString

      public String getInfoAsString(int index)
      Overrides:
      getInfoAsString in class AtomShape
      Returns:
      script, but only for Measures

    • setVisibilityInfo

      public void setVisibilityInfo()