Class FilteringIterator
java.lang.Object
htsjdk.variant.variantcontext.filter.FilteringVariantContextIterator
htsjdk.variant.variantcontext.filter.FilteringIterator
- All Implemented Interfaces:
CloseableIterator<VariantContext>,Closeable,AutoCloseable,Iterable<VariantContext>,Iterator<VariantContext>
Deprecated.
A filtering iterator for VariantContexts that takes a base iterator and a VariantContextFilter.
The iterator returns all the variantcontexts for which the filter's function "test" returns true (and only those)
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Constructor Summary
ConstructorsConstructorDescriptionFilteringIterator(Iterator<VariantContext> iterator, VariantContextFilter filter) Deprecated. -
Method Summary
Methods inherited from class htsjdk.variant.variantcontext.filter.FilteringVariantContextIterator
close, hasNext, iterator, next, removeMethods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, waitMethods inherited from interface htsjdk.samtools.util.CloseableIterator
stream, toListMethods inherited from interface java.lang.Iterable
forEach, spliteratorMethods inherited from interface java.util.Iterator
forEachRemaining
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Constructor Details
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FilteringIterator
Deprecated.
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FilteringVariantContextIteratorinstead