Package htsjdk.samtools.util

Class IntervalCoordinateComparator

java.lang.Object
htsjdk.samtools.util.IntervalCoordinateComparator
All Implemented Interfaces:
Serializable, Comparator<Interval>
public class IntervalCoordinateComparator extends Object implements Comparator<Interval>, Serializable
Comparator that orders intervals based on their sequence index, by coordinate then by strand and finally by name.
See Also:

  • Constructor Details

    • IntervalCoordinateComparator

      public IntervalCoordinateComparator(SAMFileHeader header)
      Constructs a comparator using the supplied sequence header.

  • Method Details