Package htsjdk.samtools.cram.io

Class DefaultBitInputStream

java.lang.Object
java.io.InputStream
java.io.FilterInputStream
java.io.DataInputStream
htsjdk.samtools.cram.io.DefaultBitInputStream
All Implemented Interfaces:
BitInputStream, Closeable, DataInput, AutoCloseable
public class DefaultBitInputStream extends DataInputStream implements BitInputStream
Must not read from delegate unless no bits left in the buffer!!!

  • Constructor Details

    • DefaultBitInputStream

      public DefaultBitInputStream(InputStream in)

  • Method Details

    • readBit

      public final boolean readBit()
      Description copied from interface: BitInputStream
      Reads a single bit from the stream.
      Specified by:
      readBit in interface BitInputStream

    • readBits

      public final int readBits(int n)
      Description copied from interface: BitInputStream
      Read specified number of bits from the stream. The bits are return in an integer value.
      Specified by:
      readBits in interface BitInputStream
      Parameters:
      n - number of bits to read

    • readLongBits

      public final long readLongBits(int n)
      Description copied from interface: BitInputStream
      Read specified number of bits from the stream. The bits are return in a long value.
      Specified by:
      readLongBits in interface BitInputStream
      Parameters:
      n - number of bits to read

    • reset

      public void reset()
      Overrides:
      reset in class FilterInputStream