ReadsEncoder (htsjdk 3.0.4 API)

All Superinterfaces:: AutoCloseable, Closeable, HtsEncoder<SAMFileHeader,SAMRecord>

All Known Implementing Classes:: BAMEncoder, BAMEncoderV1_0, CRAMEncoder, CRAMEncoderV2_1, CRAMEncoderV3_0, SAMEncoder, SAMEncoderV1_0

public interface ReadsEncoder extends HtsEncoder<SAMFileHeader,SAMRecord>

Base interface for HtsContentType.ALIGNED_READS encoders.

Method Summary

Methods inherited from interface htsjdk.beta.plugin.HtsEncoder
close, getDisplayName, getFileFormat, getVersion, setHeader, write