VCFEncoderV4_1 (htsjdk 3.0.4 API)

java.lang.Object

htsjdk.beta.codecs.variants.vcf.VCFEncoder

htsjdk.beta.codecs.variants.vcf.vcfv4_1.VCFEncoderV4_1

All Implemented Interfaces:: HtsEncoder<VCFHeader,VariantContext>, VariantsEncoder, Closeable, AutoCloseable

public class VCFEncoderV4_1 extends VCFEncoder

VCF V4.1 encoder.

Constructor Summary

Constructors

Constructor

Description

VCFEncoderV4_1(Bundle outputBundle, VariantsEncoderOptions variantsEncoderOptions)

Create a new VCF V4.1 encoder.
Method Summary

Modifier and Type

Method

Description

HtsVersion

getVersion()

Get the version of the file format supported by this encoder.

Methods inherited from class htsjdk.beta.codecs.variants.vcf.VCFEncoder
close, getDisplayName, getFileFormat, getOutputBundle, getVariantsEncoderOptions, setHeader, write

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details
- VCFEncoderV4_1
  
  public VCFEncoderV4_1(Bundle outputBundle, VariantsEncoderOptions variantsEncoderOptions)
  
  Create a new VCF V4.1 encoder.
  
  Parameters:
  
  outputBundle - the output Bundle to encoder
  
  variantsEncoderOptions - the VariantsEncoderOptions to use
Method Details
- getVersion
  
  public HtsVersion getVersion()
  
  Description copied from interface: HtsEncoder
  
  Get the version of the file format supported by this encoder.